BioInt
1.02.00
BioInt: An integrative biological object-oriented application framework and interpreter
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#include <BioSingleBlast.h>
Public Member Functions | |
BioSingleBlast (vector< string > oneBlast) | |
string | getSequenceName () |
int | getSequenceLength () |
int | getAlignedFragmentLength () |
int | getNumberOfIdentities () |
int | getNumberOfGaps () |
int | getNumberOfPositives () |
float | getScore () |
double | getEValue () |
void | showAlignment (ostream &os=cout) |
vector< string > | getAlignment () |
Friends | |
bool | operator< (const BioSingleBlast &x, const BioSingleBlast &y) |
bool | operator> (const BioSingleBlast &x, const BioSingleBlast &y) |
bool | operator== (const BioSingleBlast &x, const BioSingleBlast &y) |
BioSingleBlast::BioSingleBlast | ( | vector< string > | oneBlast | ) |
vector<string> BioSingleBlast::getAlignment | ( | ) |
double BioSingleBlast::getEValue | ( | ) |
int BioSingleBlast::getNumberOfGaps | ( | ) |
float BioSingleBlast::getScore | ( | ) |
string BioSingleBlast::getSequenceName | ( | ) |
void BioSingleBlast::showAlignment | ( | ostream & | os = cout | ) |
bool operator< | ( | const BioSingleBlast & | x, |
const BioSingleBlast & | y | ||
) | [friend] |
bool operator== | ( | const BioSingleBlast & | x, |
const BioSingleBlast & | y | ||
) | [friend] |
bool operator> | ( | const BioSingleBlast & | x, |
const BioSingleBlast & | y | ||
) | [friend] |