BioSingleBlast Class Reference

#include <BioSingleBlast.h>

List of all members.

Public Member Functions
	BioSingleBlast (vector< string > oneBlast)
string	getSequenceName ()
int	getSequenceLength ()
int	getAlignedFragmentLength ()
int	getNumberOfIdentities ()
int	getNumberOfGaps ()
int	getNumberOfPositives ()
float	getScore ()
double	getEValue ()
void	showAlignment (ostream &os=cout)
vector< string >	getAlignment ()
Friends
bool	operator< (const BioSingleBlast &x, const BioSingleBlast &y)
bool	operator> (const BioSingleBlast &x, const BioSingleBlast &y)
bool	operator== (const BioSingleBlast &x, const BioSingleBlast &y)

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Constructor & Destructor Documentation

BioSingleBlast::BioSingleBlast

(

vector< string >

oneBlast

)

---

Member Function Documentation

int BioSingleBlast::getAlignedFragmentLength

(

)

vector<string> BioSingleBlast::getAlignment

(

)

double BioSingleBlast::getEValue

(

)

int BioSingleBlast::getNumberOfGaps

(

)

int BioSingleBlast::getNumberOfIdentities

(

)

int BioSingleBlast::getNumberOfPositives

(

)

float BioSingleBlast::getScore

(

)

int BioSingleBlast::getSequenceLength

(

)

string BioSingleBlast::getSequenceName

(

)

void BioSingleBlast::showAlignment

(

ostream &

os = cout

)

---

Friends And Related Function Documentation

bool operator<	(	const BioSingleBlast &	x,
		const BioSingleBlast &	y
	)		[friend]

bool operator==	(	const BioSingleBlast &	x,
		const BioSingleBlast &	y
	)		[friend]

bool operator>	(	const BioSingleBlast &	x,
		const BioSingleBlast &	y
	)		[friend]

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The documentation for this class was generated from the following file:

• BioSingleBlast.h