BioInt  1.02.00
BioInt: An integrative biological object-oriented application framework and interpreter
BioMultipleGenBank Class Reference

#include <BioMultipleGenBank.h>

List of all members.

Public Member Functions

 BioMultipleGenBank ()
 ~BioMultipleGenBank ()
 BioMultipleGenBank (const string &)
long getNumberOfEntries ()
long getNumberOfOccurrencesOfGene (const string &)
long getNumberOfGenomes ()
BioMultipleGenBank getEntriesByOrganism (const string &)
BioMultipleGenBank getEntriesByGene (const string &)
BioMultipleGenBank getEntriesByGenomes ()
vector< string > getUniqueGenes ()
vector< string > getUniqueOrganisms ()
BioGenBank getEntry (const string &)
BioGenBank getEntry (unsigned long)
bool findDefinition (unsigned long i, const string &)
bool findLocus (unsigned long i, const string &)
bool findAccession (unsigned long i, const string &)
bool findSource (unsigned long i, const string &)
bool findOrganism (unsigned long i, const string &)
bool findTaxanomy (unsigned long i, const string &)
bool findKeyword (unsigned long i, const string &)
void showInMultipleFasta (const string &)
void showInMultipleFasta (ostream &=cout)
void showInFasta (int, ostream &=cout)
void pushEntry (BioGenBank)

Friends

BioMultipleGenBank operator+= (BioMultipleGenBank &, BioGenBank)
BioMultipleGenBank operator+ (BioMultipleGenBank, BioGenBank &)
BioMultipleGenBank operator+ (BioGenBank &, BioGenBank &)

Constructor & Destructor Documentation


Member Function Documentation

bool BioMultipleGenBank::findAccession ( unsigned long  i,
const string &   
)
bool BioMultipleGenBank::findDefinition ( unsigned long  i,
const string &   
)
bool BioMultipleGenBank::findKeyword ( unsigned long  i,
const string &   
)
bool BioMultipleGenBank::findLocus ( unsigned long  i,
const string &   
)
bool BioMultipleGenBank::findOrganism ( unsigned long  i,
const string &   
)
bool BioMultipleGenBank::findSource ( unsigned long  i,
const string &   
)
bool BioMultipleGenBank::findTaxanomy ( unsigned long  i,
const string &   
)
void BioMultipleGenBank::showInFasta ( int  ,
ostream &  = cout 
)
void BioMultipleGenBank::showInMultipleFasta ( const string &  )
void BioMultipleGenBank::showInMultipleFasta ( ostream &  = cout)

Friends And Related Function Documentation

BioMultipleGenBank operator+ ( BioMultipleGenBank  ,
BioGenBank  
) [friend]
BioMultipleGenBank operator+ ( BioGenBank ,
BioGenBank  
) [friend]
BioMultipleGenBank operator+= ( BioMultipleGenBank ,
BioGenBank   
) [friend]

The documentation for this class was generated from the following file:
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