BioFTKSingleGene.h

Go to the documentation of this file.

/****************************************************************************
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
The BioBhasha : A Programming Language for Biologist
Version 1.0 (19th December 2001)
Dr. Prasad, B.V.L.S.
Contact: prasadbvls@helixgenomics.com
Version 1.1 (23th January 2003)
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
*****************************************************************************/

#ifndef BIOFTKSINGLEGENE_H
#define BIOFTKSINGLEGENE_H

using namespace std;

#include <string>
#include <fstream>
#include <iostream>
#include <vector>

#include "BioFTQAllele.h"
#include "BioFTQNote.h"
#include "BioFTQCitation.h"
#include "BioFTQDbXref.h"
#include "BioFTQEvidence.h"
#include "BioFTQFunction.h"
#include "BioFTQGene.h"
#include "BioFTQLabel.h"
#include "BioFTQLocusTag.h"
#include "BioFTQUsedIn.h"
#include "BioFTQPhenotype.h"
#include "BioFTQMap.h"
#include "BioFTQProduct.h"
#include "BioFTQStandardName.h"
#include "BioFTLBaseRange.h"

class BioFTKSingleGene:public BioFTQAllele, public BioFTQNote,
public BioFTQCitation, public BioFTQDbXref, public BioFTQEvidence,
public BioFTQFunction, public BioFTQGene, public BioFTQLabel,
public BioFTQLocusTag, public BioFTQUsedIn, public BioFTQMap,
public BioFTQStandardName, public BioFTQProduct, public BioFTQPhenotype,
public BioFTLBaseRange
{
        bool pseudo_;
                   friend bool operator >(const BioFTKSingleGene& , const BioFTKSingleGene&);
                   friend bool operator <(const BioFTKSingleGene& , const BioFTKSingleGene&);
                   friend bool operator ==(const BioFTKSingleGene& , const BioFTKSingleGene&);
public:
        BioFTKSingleGene();
        BioFTKSingleGene(const string& de_);

        bool findPseudo();

        void setFTKSingleGene(vector <string> );
  void showGene(ostream & =cout,string x =" ");
  void showPseudo(ostream& os = cout,string x =" ");
    void showFeatureQualifiers(ostream & os = cout);
};

#endif