BioSwptFTKSinglePropep.h

Go to the documentation of this file.

#ifndef BIOSWPTFTKSINGLEPROPEP_H
#define BIOSWPTFTKSINGLEPROPEP_H

#include <iostream>
#include <string>
#include <fstream>
#include "BioProteinSequence.h"
using namespace std;

class BioSwptFTKSinglePropep
{
        int from_,to_;
        string desc_;
        bool startPartial_, endPartial_;        
public:
        BioSwptFTKSinglePropep();
        BioSwptFTKSinglePropep(const string & fn);
        
        void setSwptFTKSinglePropep(string &);
        int getStartingPosition();
        int getEndingPosition();
        string getDescription();
  bool findPropep(const string&);
  bool findPartial();
  string getSequence(BioProteinSequence &);               
private:                
                        
                        
friend bool operator >(const BioSwptFTKSinglePropep& , const BioSwptFTKSinglePropep&);
friend bool operator <(const BioSwptFTKSinglePropep& , const BioSwptFTKSinglePropep&);
friend bool operator ==(const BioSwptFTKSinglePropep& , const BioSwptFTKSinglePropep&);
                        
                        
};                       
                        
                        
#endif